BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027E05LP1|AL428736
(912 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1521 1794 0.0
>3x_Contig1521
Length = 8057
Score = 1794 bits (905), Expect = 0.0
Identities = 912/913 (99%), Gaps = 1/913 (0%)
Strand = Plus / Minus
Query: 1 gatccaaatcttgtacgatcgatgatcttaatttcttggtaatttccaagagcgattgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6108 gatccaaatcttgtacgatcgatgatcttaatttcttggtaatttccaagagcgattgac 6049
Query: 61 catcagaactatgataacctatcttttctttcaatttagcttccaatgcattctggatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6048 catcagaactatgataacctatcttttctttcaatttagcttccaatgcattctggatta 5989
Query: 121 ccattataaagcttcttgcaactgctttcgatccatcttcttcatctattagatcttcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5988 ccattataaagcttcttgcaactgctttcgatccatcttcttcatctattagatcttcta 5929
Query: 181 accatccaatgcactctgcgttcatttcacaatcaacaaagatccttaccattccgatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5928 accatccaatgcactctgcgttcatttcacaatcaacaaagatccttaccattccgatta 5869
Query: 241 gtgagtgggttccataagctcgttgtgtctgtttctgagttattgaacgaagaccattta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5868 gtgagtgggttccataagctcgttgtgtctgtttctgagttattgaacgaagaccattta 5809
Query: 301 ctgtaaatctttctactatattatatatttttacattaactcttttttatataacttgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5808 ctgtaaatctttctactatattatatatttttacattaactcttttttatataacttgta 5749
Query: 361 aaatggagttaaaaggaaatttagccgctgatgccttcgctaaaatatttaactgctcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5748 aaatggagttaaaaggaaatttagccgctgatgccttcgctaaaatatttaactgctcaa 5689
Query: 421 ttagccttctcagtatgtagatgtgacagcaagataaaatactcttttgatacgttgtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5688 ttagccttctcagtatgtagatgtgacagcaagataaaatactcttttgatacgttgtga 5629
Query: 481 ctttctaccgttcttcgcaatgcctgcagaagtttaatatctctttgccttggtttgtta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5628 ctttctaccgttcttcgcaatgcctgcagaagtttaatatctctttgccttggtttgtta 5569
Query: 541 aggtatgatgaacagacaagtaattttaattttgtcgaaaagaatgaaaaatataataat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5568 aggtatgatgaacagacaagtaattttaattttgtcgaaaagaatgaaaaatataataat 5509
Query: 601 tttcaaaacacgaacaaaacaagtaatgttggagatttcccagcgcatcgaatttcccaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5508 tttcaaaacacgaacaaaacaagtaatgttggagatttcccagcgcatcgaatttcccaa 5449
Query: 661 tagggaaattatcaaagcagcattttcatgccactgaatcgctaatccatctaggtgaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5448 tagggaaattatcaaagcagcattttcatgccactgaatcgctaatccatctaggtgaat 5389
Query: 721 gatttctaacgacagatttaggtaatccactgataaagaatgagagtattatattccttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5388 gatttctaacgacagatttaggtaatccactgataaagaatgagagtattatattccttt 5329
Query: 781 catttttctttaggaatcacaaagcgactgattattggcaa-cccatatcttttaggcat 839
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5328 catttttctttaggaatcacaaagcgactgattattggcaaccccatatcttttaggcat 5269
Query: 840 ctccccttcgtgctgatctgtaaattgaaggtttatcaacacctgtgtatatataagaac 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5268 ctccccttcgtgctgatctgtaaattgaaggtttatcaacacctgtgtatatataagaac 5209
Query: 900 tgagtcggtgcat 912
|||||||||||||
Sbjct: 5208 tgagtcggtgcat 5196
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8918
Number of Sequences: 1807
Number of extensions: 8918
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 912
length of database: 10,358,551
effective HSP length: 16
effective length of query: 896
effective length of database: 10,329,639
effective search space: 9255356544
effective search space used: 9255356544
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)